Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900710.1_cds_XP_016450731.1_45153
CDS Infomation

[gene=LOC107775507] [db_xref=GeneID:107775507] [protein=probable WRKY transcription factor 20] [protein_id=XP_016450731.1] [location=join(2076..2396,3363..3506,4966..5524,5647..5803,5877..6032,9621..9924,10081..10269)] [gbkey=CDS]
Sequence

ATGGAAGATTCTCAGTCTCAGTCTCAGTCTCATTATTCCCAGCAGTACAGCCACTCATCT
CCACTACCCTCCATTAATGAGTCTTCGGAGCAGCAACTCAAAATCTCAAGCTCCGATGCT
TCCGCCGTTGGATCGAACAGCAGTAGAGGTGCTAAATATAAGCTCATGTCCCCCGCTAAG
CTCCCGATCTCTCGTTCCGCATGTATCACTATCCCTCCTGGTCTCAGTCCTTCTTCCTTT
CTCGAATCTCCCGTACTCCTTTCTAACATCAAAGTTAGTTCTCTTTTTTTTAAACCGTTG
TTGAAGAAATTTATGCTTGCGAGAAAAAAGGATTCCCCCCCCCNCCTTTCATTTATGAGA
AGCTGTTCCAGTGGAAATGCATATGGTGAAACGACCGGCGAATTTGAGTTTAAATTTGCT
ATTGGATCTAGTTCTACATCAGGATCACTGGCGAAGGAAGCTGCGACCTTTGCAGGTTTG
AACCAACAGCAAAGTGAACCACTGAATCAAATTGAAGATCGATATCTTTTTCAGTCATTT
GCACCTTCAGCTCTTGTTAGAAGTGAGATGCCTAATTCAAAAGAAGTGAGTCTACCTGCA
CCTGTTAGTTTAGATGCCTCGTCCATTAGTACTGCCGCTGCTGATGCTGCTGCAATTGAT
AATGAGGAAATAAGTCAGAGAGGTCACTCAAATCCAAGCTCGCAAGGGTTACATGCTGAT
AATAGAGATGTATCATCGATAACAGCTGAGAGATCATCAGATGATGGGTATAACTGGAGA
AAGTATGGCCAGAAACTTGTTAAAGGTAGTGAATTCCCAAGGAGCTACTACAAATGTACA
TACCCAAACTGTGAAGTTAAAAAGATATTTGAGCGCTCTCCTGAAGGACAAATAACAGAG
ATTGTCTATAAAGGTTCACATGATCATCCTAAACCTCAACCCAGCCGTAGGTTTACACCT
GGTGCTCTTACGTCCATCCAGGAAGACAGAAGTGAGAAAGAAGCATCCTTCACTGGTCAA
GAAGACAAATTCAACACTAATGCCTACACCAGTAACATTGAACCCAGTAGTACTCCAGTA
TCACCTCGACTAGCAGAAGATGATGGTCTTGAAGGTACAGTGTCCCAGTTGCAGAGCGCT
AATGATCAACTAGACGAGGATGATCCATTTGCGAAAAGAAGGAAAATGGATGGCGGGATG
GATATTACACCAGTTGTTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACTGTGAGT
GAAGTTGATATATTGGATGACGGATACAGGTGGCGGAAATATGGTCAAAAGGTGGTCCGT
GGAAATCCTAATCCCAGGAGTTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAA
CATGTGGAGAGGGCATCCCATGATCCCAAAGCTGTAATTACTACCTATGAGGGGAAACAC
AATCACGATGTACCAACAGCTAGGAATCATAGCCATGAAATGGCAGGATCGGCGCCTGTA
ACTGGAAGTTCACGGGTCAGGGCAGAAGAGAATGGCTCAATTAGCTTGGATCTAGGTGTT
GGCATAGGATATGGTATGGAGAATAGGAGCAATGGACAACTTTACACACGGCCTGCAGAA
AGTGTACGTAACCAAGTTCAGGTTTCAAGTTCTAGTATGATGGTAGTACAACCAGGTGCT
GTTGCAGCATGCTATGGCATTGTAAATGGTGGCATGAGTCGATTTGGATCTATAGATAAT
CGTATTCAGGGCACGGGCTTCGAGTCTCTGCCCTTGCAACCTTCTACTCAATGTCCTCAA
AACTATGGAAGGATAATTTTGGGCCCATGA

Peptide Sequence

PEP ID

XP_016450731.1
PEP Infomation

PREDICTED: probable WRKY transcription factor 20 [Nicotiana tabacum]
Sequence

MEDSQSQSQSHYSQQYSHSSPLPSINESSEQQLKISSSDASAVGSNSSRGAKYKLMSPAK
LPISRSACITIPPGLSPSSFLESPVLLSNIKVSSLFFKPLLKKFMLARKKDSPPXLSFMR
SCSSGNAYGETTGEFEFKFAIGSSSTSGSLAKEAATFAGLNQQQSEPLNQIEDRYLFQSF
APSALVRSEMPNSKEVSLPAPVSLDASSISTAAADAAAIDNEEISQRGHSNPSSQGLHAD
NRDVSSITAERSSDDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSPEGQITE
IVYKGSHDHPKPQPSRRFTPGALTSIQEDRSEKEASFTGQEDKFNTNAYTSNIEPSSTPV
SPRLAEDDGLEGTVSQLQSANDQLDEDDPFAKRRKMDGGMDITPVVKPIREPRVVVQTVS
EVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKH
NHDVPTARNHSHEMAGSAPVTGSSRVRAEENGSISLDLGVGIGYGMENRSNGQLYTRPAE
SVRNQVQVSSSSMMVVQPGAVAACYGIVNGGMSRFGSIDNRIQGTGFESLPLQPSTQCPQ
NYGRIILGP

Transcript Sequence

Gene sequence data has not been registered.